Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G47330.1
PEP
AT1G47330.1
Position on the Genome Chromosome Chr1
Start Position 17351149
End Position 17353739
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI04778000
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
CNNM, transmembrane domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Uncharacterized protein
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF01595
Pfam Description Details
InterPro ID
IPR000644,IPR002550
InterPro Description Details
GO ID
GO:0016021
GO Description Details
GOslim ID
GO:0016020
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Uncharacterized protein
OrthoDB(1 item)
76214at33090
CNNM, transmembrane domain
Pfam(1 item)
 
Domain of unknown function DUF21
InterPro(2 items)
 
CNNM, transmembrane domain
Gene ontology(1 item)
CC
integral component of membrane
GO slim(1 item)

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.