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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G47260.1
PEP
AT1G47260.1
Position on the Genome Chromosome Chr1
Start Position 17321384
End Position 17323347
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00635498
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Hexapeptide repeat
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Gamma carbonic anhydrase 2, mitochondrial
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF00132
Pfam Description Details
InterPro ID
IPR011004,IPR001451
InterPro Description Details
GO ID
GO:0070207,GO:0004089,GO:0005634,GO:2000377,GO:0009853,GO:0005747,GO:0009901,GO:0045271,GO:0005739,GO:0042802,GO:0031966,GO:0046872
GO Description Details
GOslim ID
GO:0005634,GO:0030964,GO:0043094,GO:0016829,GO:0065003,GO:0005739,GO:0008152,GO:0000003,GO:0032501,GO:0043167,GO:0032502,GO:0050789,GO:0016020,GO:0005515
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G47260
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Gamma carbonic anhydrase 2, mitochondrial
OrthoDB(1 item)
173269at33090
Hexapeptide repeat
Pfam(1 item)
 
Bacterial transferase hexapeptide (six repeats)
InterPro(2 items)
 
Trimer_LpxA-like_sf
 
Hexapeptide repeat
Gene ontology(12 items)
BP
protein homotrimerization
MF
carbonate dehydratase activity
BP
regulation of reactive oxygen species metabolic process
BP
photorespiration
CC
mitochondrial respiratory chain complex I
BP
anther dehiscence
CC
respiratory chain complex I
CC
mitochondrion
MF
identical protein binding
CC
mitochondrial membrane
MF
metal ion binding
GO slim(14 items)
CC
NADH dehydrogenase complex
BP
cellular metabolic compound salvage
MF
lyase activity
BP
protein-containing complex assembly
CC
mitochondrion
BP
metabolic process
BP
multicellular organismal process
BP
developmental process
BP
regulation of biological process
MF
protein binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.