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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G43160.1
PEP
AT1G43160.1
Position on the Genome Chromosome Chr1
Start Position 16263989
End Position 16264663
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00404195
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Ethylene-responsive transcription factor RAP2-6
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Ethylene-responsive transcription factor RAP2-6
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF00847
Pfam Description Details
InterPro ID
IPR036955,IPR016177,IPR001471
InterPro Description Details
GO ID
GO:0003700,GO:0006952,GO:0034605,GO:0009751,GO:0006970,GO:0009409,GO:0045893,GO:0003677,GO:0009873,GO:0009651,GO:0009611,GO:0005634,GO:0009753,GO:0009414,GO:0009737,GO:0009658
GO Description Details
GOslim ID
GO:0050896,GO:0003676,GO:0050789,GO:0006351,GO:0065009,GO:0005634,GO:0007154,GO:0005575,GO:0009657
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
ERF family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G43160
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Ethylene-responsive transcription factor RAP2-6
OrthoDB(1 item)
195206at33090
Ethylene-responsive transcription factor RAP2-6
Pfam(1 item)
 
AP2 domain
InterPro(3 items)
 
AP2/ERF_dom_sf
 
DNA-bd_dom_sf
 
AP2/ERF domain
Gene ontology(16 items)
MF
DNA-binding transcription factor activity
BP
defense response
BP
cellular response to heat
BP
response to salicylic acid
BP
response to osmotic stress
BP
response to cold
BP
positive regulation of transcription, DNA-templated
BP
ethylene-activated signaling pathway
BP
response to salt stress
BP
response to wounding
BP
response to jasmonic acid
BP
response to water deprivation
BP
response to abscisic acid
BP
chloroplast organization
GO slim(9 items)
BP
response to stimulus
MF
nucleic acid binding
BP
regulation of biological process
BP
transcription, DNA-templated
BP
regulation of molecular function
BP
cell communication
CC
cellular_component
BP
plastid organization

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.