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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G35560.1
PEP
AT1G35560.1
Position on the Genome Chromosome Chr1
Start Position 13116099
End Position 13117124
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00579722
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Transcription factor, TCP
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Transcription factor TCP23
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF03634
Pfam Description Details
InterPro ID
IPR017887,IPR005333
InterPro Description Details
GO ID
GO:0048510,GO:0006355,GO:0000976,GO:0005634,GO:0043565,GO:0042802,GO:0003700
GO Description Details
GOslim ID
GO:0065009,GO:0050789,GO:0006351,GO:0003676,GO:0032502,GO:0005515,GO:0005634
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
TCP family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Transcription factor TCP23
OrthoDB(1 item)
180370at33090
Transcription factor, TCP
Pfam(1 item)
 
TCP family transcription factor
InterPro(2 items)
 
Transcription factor, TCP
Gene ontology(7 items)
BP
regulation of timing of transition from vegetative to reproductive phase
BP
regulation of transcription, DNA-templated
MF
transcription regulatory region sequence-specific DNA binding
MF
sequence-specific DNA binding
MF
identical protein binding
MF
DNA-binding transcription factor activity
GO slim(7 items)
BP
regulation of molecular function
BP
regulation of biological process
BP
transcription, DNA-templated
MF
nucleic acid binding
BP
developmental process
MF
protein binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.