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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G34355.1
PEP
AT1G34355.1
Position on the Genome Chromosome Chr1
Start Position 12536497
End Position 12541730
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00075091
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
PIN domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
FHA domain-containing protein PS1
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00498,PF13638
Pfam Description Details
InterPro ID
IPR000253,IPR029060,IPR008984,IPR002716
InterPro Description Details
GO ID
GO:0009555,GO:0051321
GO Description Details
GOslim ID
GO:0007049,GO:0000280,GO:0032502,GO:0032501,GO:0000003
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
FHA domain-containing protein PS1
OrthoDB(1 item)
23175at33090
PIN domain
Pfam(2 items)
 
FHA domain
 
PIN domain
InterPro(4 items)
 
Forkhead-associated (FHA) domain
 
PIN-like_dom_sf
 
SMAD_FHA_dom_sf
Gene ontology(2 items)
BP
pollen development
BP
meiotic cell cycle
GO slim(5 items)
BP
nuclear division
BP
developmental process
BP
multicellular organismal process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.