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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G34300.1
PEP
AT1G34300.1
Position on the Genome Chromosome Chr1
Start Position 12503450
End Position 12505939
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00459096
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Bulb-type lectin domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF01453,PF00954,PF00069
Pfam Description Details
InterPro ID
IPR011009,IPR036426,IPR000719,IPR024171,IPR001480,IPR008271,IPR017441,IPR000858
InterPro Description Details
GO ID
GO:0004674,GO:0016021,GO:0030246,GO:0048544,GO:0005516,GO:0005524,GO:0005886
GO Description Details
GOslim ID
GO:0006464,GO:0006793,GO:0005515,GO:0051704,GO:0030246,GO:0016740,GO:0008037,GO:0032501,GO:0000166,GO:0016020,GO:0007154,GO:0000003,GO:0043167
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300
OrthoDB(1 item)
17088at33090
Bulb-type lectin domain
Pfam(3 items)
 
D-mannose binding lectin
 
S-locus glycoprotein domain
 
Protein kinase domain
InterPro(8 items)
 
Kinase-like_dom_sf
 
Bulb-type_lectin_dom_sf
 
Protein kinase domain
 
SRK-like_kinase
 
Bulb-type lectin domain
 
Ser/Thr_kinase_AS
 
Protein_kinase_ATP_BS
 
S-locus glycoprotein domain
Gene ontology(7 items)
MF
protein serine/threonine kinase activity
CC
integral component of membrane
MF
carbohydrate binding
BP
recognition of pollen
MF
calmodulin binding
CC
plasma membrane
GO slim(13 items)
BP
cellular protein modification process
BP
phosphorus metabolic process
MF
protein binding
BP
multi-organism process
MF
carbohydrate binding
MF
transferase activity
BP
cell recognition
BP
multicellular organismal process
MF
nucleotide binding
BP
cell communication

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.