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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G34000.1
PEP
AT1G34000.1
Position on the Genome Chromosome Chr1
Start Position 12358151
End Position 12358902
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00424760
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Light-harvesting complex-like protein OHP2
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Light-harvesting complex-like protein OHP2, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
NA
Pfam Description
InterPro ID
IPR037492
InterPro Description Details
GO ID
GO:0005634,GO:0009534,GO:0009507,GO:0009642,GO:0016021,GO:0010207,GO:0009535
GO Description Details
GOslim ID
GO:0005634,GO:0009579,GO:0050896,GO:0009536,GO:0065003,GO:0006091,GO:0016020,GO:0015979
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Light-harvesting complex-like protein OHP2, chloroplastic
OrthoDB(1 item)
229206at33090
Light-harvesting complex-like protein OHP2
InterPro(1 item)
Gene ontology(7 items)
CC
chloroplast thylakoid
BP
response to light intensity
CC
integral component of membrane
BP
photosystem II assembly
CC
chloroplast thylakoid membrane
GO slim(8 items)
BP
response to stimulus
BP
protein-containing complex assembly
BP
generation of precursor metabolites and energy
BP
photosynthesis

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.