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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G33240.1
PEP
AT1G33240.1
Position on the Genome Chromosome Chr1
Start Position 12051859
End Position 12054320
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01199448
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
SANT/Myb domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Trihelix transcription factor GTL1
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
NA
Pfam Description
InterPro ID
IPR001005,IPR017877
InterPro Description Details
GO ID
GO:0009414,GO:0003677,GO:0008361,GO:0045892,GO:0043565,GO:0030308,GO:0010090,GO:2000037,GO:0003700,GO:0042631,GO:0005634,GO:2000038,GO:0032876,GO:0006351
GO Description Details
GOslim ID
GO:0006351,GO:0050789,GO:0003676,GO:0032502,GO:0006260,GO:0016043,GO:0016049,GO:0050896,GO:0007154,GO:0065009,GO:0032501,GO:0065008,GO:0005634,GO:0007049
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
Trihelix family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Trihelix transcription factor GTL1
OrthoDB(1 item)
122416at33090
SANT/Myb domain
InterPro(2 items)
 
SANT/Myb domain
Gene ontology(14 items)
BP
response to water deprivation
BP
regulation of cell size
BP
negative regulation of transcription, DNA-templated
MF
sequence-specific DNA binding
BP
negative regulation of cell growth
BP
trichome morphogenesis
BP
regulation of stomatal complex patterning
MF
DNA-binding transcription factor activity
BP
cellular response to water deprivation
BP
regulation of stomatal complex development
BP
negative regulation of DNA endoreduplication
BP
transcription, DNA-templated
GO slim(14 items)
BP
transcription, DNA-templated
BP
regulation of biological process
MF
nucleic acid binding
BP
developmental process
BP
DNA replication
BP
cellular component organization
BP
response to stimulus
BP
cell communication
BP
regulation of molecular function
BP
multicellular organismal process
BP
regulation of biological quality

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.