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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G32640.1
PEP
AT1G32640.1
Position on the Genome Chromosome Chr1
Start Position 11799042
End Position 11800913
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00460174
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Transcription factor MYC/MYB N-terminal
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Transcription factor MYC2
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF14215,PF00010
Pfam Description Details
InterPro ID
IPR025610,IPR036638,IPR011598
InterPro Description Details
GO ID
GO:0005634,GO:0043565,GO:0010200,GO:2000068,GO:0009738,GO:0003700,GO:0000976,GO:0106167,GO:0009737,GO:0019900,GO:0006355,GO:0009269,GO:0051289,GO:0043619,GO:0010374,GO:0046983,GO:0045893,GO:0009753,GO:0009963,GO:0003677,GO:0051090,GO:0009611,GO:2000652
GO Description Details
GOslim ID
GO:0050789,GO:0050896,GO:0006351,GO:0003676,GO:0005515,GO:0065009,GO:0007154,GO:0065003,GO:0044419,GO:0032502,GO:0044238,GO:0044085,GO:0005634,GO:0032501
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
bHLH family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G32640
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Transcription factor MYC2
OrthoDB(1 item)
45085at33090
Transcription factor MYC/MYB N-terminal
Pfam(2 items)
 
bHLH-MYC and R2R3-MYB transcription factors N-terminal
 
Helix-loop-helix DNA-binding domain
InterPro(3 items)
 
Transcription factor MYC/MYB N-terminal
 
HLH_DNA-bd_sf
 
Myc-type, basic helix-loop-helix (bHLH) domain
Gene ontology(23 items)
MF
sequence-specific DNA binding
BP
response to chitin
BP
regulation of defense response to insect
BP
abscisic acid-activated signaling pathway
MF
DNA-binding transcription factor activity
MF
transcription regulatory region sequence-specific DNA binding
BP
extracellular ATP signaling
BP
response to abscisic acid
MF
kinase binding
BP
regulation of transcription, DNA-templated
BP
response to desiccation
BP
protein homotetramerization
BP
regulation of transcription from RNA polymerase II promoter in response to oxidative stress
BP
stomatal complex development
MF
protein dimerization activity
BP
positive regulation of transcription, DNA-templated
BP
response to jasmonic acid
BP
positive regulation of flavonoid biosynthetic process
BP
regulation of DNA-binding transcription factor activity
BP
response to wounding
BP
regulation of secondary cell wall biogenesis
GO slim(14 items)
BP
regulation of biological process
BP
response to stimulus
BP
transcription, DNA-templated
MF
nucleic acid binding
MF
protein binding
BP
regulation of molecular function
BP
cell communication
BP
protein-containing complex assembly
BP
interspecies interaction between organisms
BP
developmental process
BP
primary metabolic process
BP
cellular component biogenesis
BP
multicellular organismal process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.