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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G32340.1
PEP
AT1G32340.1
Position on the Genome Chromosome Chr1
Start Position 11663462
End Position 11666037
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01484328
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
RBR-type E3 ubiquitin transferase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
F5D14.10 protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF05773,PF01485
Pfam Description Details
InterPro ID
IPR006575,IPR031127,IPR017907,IPR002867,IPR013083,IPR044066,IPR016135,IPR001841
InterPro Description Details
GO ID
GO:0000209,GO:0032436,GO:0006511,GO:0005737,GO:0061630,GO:0046872,GO:0031624,GO:0000151
GO Description Details
GOslim ID
GO:0006508,GO:0043167,GO:0006464,GO:0009057,GO:0000151,GO:0005737,GO:0050789,GO:0019787,GO:0005515
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G32340
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.