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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G30380.1
PEP
AT1G30380.1
Position on the Genome Chromosome Chr1
Start Position 10722325
End Position 10723013
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00070336
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Photosystem I reaction centre subunit psaK, chloroplastic
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Photosystem I reaction center subunit psaK, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF01241
Pfam Description Details
InterPro ID
IPR035982,IPR016370,IPR000549,IPR017493,IPR023618
InterPro Description Details
GO ID
GO:0009507,GO:0005634,GO:0009579,GO:0009534,GO:0009522,GO:0016021,GO:0009535,GO:0015979
GO Description Details
GOslim ID
GO:0009579,GO:0009521,GO:0009536,GO:0016020,GO:0005634,GO:0015979
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G30380
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Photosystem I reaction center subunit psaK, chloroplastic
OrthoDB(1 item)
210649at33090
Photosystem I reaction centre subunit psaK, chloroplastic
Pfam(1 item)
 
Photosystem I psaG / psaK
InterPro(5 items)
 
PSI_centre_PsaK_sf
 
PSI_PsaG/PsaK_pln
 
Photosystem I PsaG/PsaK protein
 
PSI_PsaG/PsaK_dom
Gene ontology(8 items)
CC
chloroplast thylakoid
CC
photosystem I
CC
integral component of membrane
CC
chloroplast thylakoid membrane
BP
photosynthesis
GO slim(6 items)
BP
photosynthesis

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.