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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G28580.1
PEP
AT1G28580.1
Position on the Genome Chromosome Chr1
Start Position 10044603
End Position 10046379
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00319635
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
GDSL lipase/esterase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
GDSL esterase/lipase At1g28580
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF00657
Pfam Description Details
InterPro ID
IPR001087,IPR036514,IPR035669
InterPro Description Details
GO ID
GO:0016042,GO:0016788,GO:0005576,GO:0005773
GO Description Details
GOslim ID
GO:0006629,GO:0005576,GO:0005773,GO:0016787
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
GDSL esterase/lipase At1g28580
OrthoDB(1 item)
106453at33090
GDSL lipase/esterase
Pfam(1 item)
 
GDSL-like Lipase/Acylhydrolase
InterPro(3 items)
 
GDSL lipase/esterase
 
SGNH_hydro_sf
 
SGNH_plant_lipase-like
Gene ontology(4 items)
BP
lipid catabolic process
MF
hydrolase activity, acting on ester bonds
CC
extracellular region
GO slim(4 items)
BP
lipid metabolic process
CC
extracellular region
MF
hydrolase activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.