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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G28520.1
PEP
AT1G28520.1
Position on the Genome Chromosome Chr1
Start Position 10029713
End Position 10031479
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00087419
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Transcription factor VOZ1/VOZ2
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Transcription factor VOZ1
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
NA
Pfam Description
InterPro ID
IPR039277
InterPro Description Details
GO ID
GO:0046872,GO:0005737,GO:0005634,GO:0009408,GO:0009585,GO:0048574,GO:0009414,GO:0045893,GO:0009651,GO:0043565,GO:0009816,GO:0009631,GO:0048578
GO Description Details
GOslim ID
GO:0032502,GO:0050896,GO:0000003,GO:0002376,GO:0050789,GO:0043167,GO:0006351,GO:0032501,GO:0007154,GO:0005634,GO:0051606,GO:0005737,GO:0044419,GO:0003676
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
VOZ family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Transcription factor VOZ1
OrthoDB(1 item)
52138at33090
Transcription factor VOZ1/VOZ2
InterPro(1 item)
Gene ontology(13 items)
MF
metal ion binding
BP
response to heat
BP
red, far-red light phototransduction
BP
long-day photoperiodism, flowering
BP
response to water deprivation
BP
positive regulation of transcription, DNA-templated
BP
response to salt stress
MF
sequence-specific DNA binding
BP
defense response to bacterium
BP
cold acclimation
BP
positive regulation of long-day photoperiodism, flowering
GO slim(14 items)
BP
developmental process
BP
response to stimulus
BP
immune system process
BP
regulation of biological process
BP
transcription, DNA-templated
BP
multicellular organismal process
BP
cell communication
BP
detection of stimulus
BP
interspecies interaction between organisms
MF
nucleic acid binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.