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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G28480.1
PEP
AT1G28480.1
Position on the Genome Chromosome Chr1
Start Position 10013634
End Position 10014047
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00405343
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Glutaredoxin
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Glutaredoxin-C9
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00462
Pfam Description Details
InterPro ID
IPR002109,IPR011905,IPR036249
InterPro Description Details
GO ID
GO:0005737,GO:0009055,GO:0015035,GO:0009867,GO:0000122,GO:0009863,GO:0005634,GO:0009751
GO Description Details
GOslim ID
GO:0050896,GO:0016491,GO:0050789,GO:0007154,GO:0006351,GO:0005737,GO:0005634,GO:0009055
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Glutaredoxin-C9
OrthoDB(1 item)
230817at33090
Glutaredoxin
Pfam(1 item)
 
Glutaredoxin
InterPro(3 items)
 
GlrX-like_pln_2
 
Thioredoxin-like_sf
Gene ontology(8 items)
MF
electron transfer activity
MF
protein disulfide oxidoreductase activity
BP
jasmonic acid mediated signaling pathway
BP
negative regulation of transcription by RNA polymerase II
BP
salicylic acid mediated signaling pathway
BP
response to salicylic acid
GO slim(8 items)
BP
response to stimulus
MF
oxidoreductase activity
BP
regulation of biological process
BP
cell communication
BP
transcription, DNA-templated
MF
electron transfer activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.