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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G28370.2
PEP
AT1G28370.2
Position on the Genome Chromosome Chr1
Start Position 9956351
End Position 9956965
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01432541
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
AP2/ERF domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
ERF domain protein 11
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00847
Pfam Description Details
InterPro ID
IPR016177,IPR001471,IPR036955
InterPro Description Details
GO ID
GO:0005634,GO:0003677,GO:0003700
GO Description Details
GOslim ID
GO:0050789,GO:0003676,GO:0005634,GO:0065009,GO:0006351
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
ERF family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
ERF domain protein 11
OrthoDB(1 item)
219297at33090
AP2/ERF domain
Pfam(1 item)
 
AP2 domain
InterPro(3 items)
 
DNA-bd_dom_sf
 
AP2/ERF domain
 
AP2/ERF_dom_sf
Gene ontology(3 items)
MF
DNA-binding transcription factor activity
GO slim(5 items)
BP
regulation of biological process
MF
nucleic acid binding
BP
regulation of molecular function
BP
transcription, DNA-templated

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.