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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G27210.1
PEP
AT1G27210.1
Position on the Genome Chromosome Chr1
Start Position 9455669
End Position 9457917
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00583424
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
HEAT repeat
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Uncharacterized protein
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF02985
Pfam Description Details
InterPro ID
IPR033337,IPR000357,IPR011989,IPR016024
InterPro Description Details
GO ID
GO:0005874,GO:0008017
GO Description Details
GOslim ID
GO:0005515,GO:0005856
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Uncharacterized protein
OrthoDB(1 item)
93127at33090
HEAT repeat
Pfam(1 item)
 
HEAT repeat
InterPro(4 items)
 
TORTIFOLIA1/SPIRAL2-like
 
ARM-type_fold
Gene ontology(2 items)
MF
microtubule binding
GO slim(2 items)
MF
protein binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.