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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G27120.1
PEP
AT1G27120.1
Position on the Genome Chromosome Chr1
Start Position 9421389
End Position 9423910
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00618967
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Galectin, carbohydrate recognition domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Galectin domain-containing protein
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00337,PF01762
Pfam Description Details
InterPro ID
IPR013320,IPR001079,IPR002659
InterPro Description Details
GO ID
GO:0000139,GO:0016021,GO:0030246,GO:0006486
GO Description Details
GOslim ID
GO:0005794,GO:0016020,GO:0030246,GO:0009059,GO:0006464
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Galectin domain-containing protein
OrthoDB(1 item)
30630at33090
Galectin, carbohydrate recognition domain
Pfam(2 items)
 
Galactoside-binding lectin
 
Galactosyltransferase
InterPro(3 items)
 
ConA-like_dom_sf
 
Galectin, carbohydrate recognition domain
 
Glycosyl transferase, family 31
Gene ontology(4 items)
CC
Golgi membrane
CC
integral component of membrane
MF
carbohydrate binding
BP
protein glycosylation
GO slim(5 items)
CC
Golgi apparatus
MF
carbohydrate binding
BP
macromolecule biosynthetic process
BP
cellular protein modification process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.