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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G25320.1
PEP
AT1G25320.1
Position on the Genome Chromosome Chr1
Start Position 8877988
End Position 8880180
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00383094
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Leucine-rich repeat
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Uncharacterized protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00069,PF13855,PF00560,PF08263
Pfam Description Details
InterPro ID
IPR013210,IPR011009,IPR001611,IPR032675,IPR000719,IPR003591
InterPro Description Details
GO ID
GO:0004672,GO:0005524,GO:0016021
GO Description Details
GOslim ID
GO:0006464,GO:0016020,GO:0016740,GO:0006793,GO:0043167,GO:0000166
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Uncharacterized protein
OrthoDB(1 item)
32515at33090
Leucine-rich repeat
Pfam(4 items)
 
Protein kinase domain
 
Leucine rich repeat
 
Leucine Rich Repeat
 
Leucine rich repeat N-terminal domain
InterPro(6 items)
 
Leucine-rich repeat-containing N-terminal, plant-type
 
Kinase-like_dom_sf
 
Leucine-rich repeat
 
Protein kinase domain
 
Leu-rich_rpt_typical-subtyp
Gene ontology(3 items)
MF
protein kinase activity
CC
integral component of membrane
GO slim(6 items)
BP
cellular protein modification process
MF
transferase activity
BP
phosphorus metabolic process
MF
nucleotide binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.