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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G24170.1
PEP
AT1G24170.1
Position on the Genome Chromosome Chr1
Start Position 8557451
End Position 8558632
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00682872
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Hexosyltransferase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Probable galacturonosyltransferase-like 8
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF01501
Pfam Description Details
InterPro ID
IPR029044,IPR002495
InterPro Description Details
GO ID
GO:0016021,GO:0005794,GO:0047262,GO:0045489,GO:0071555,GO:0000139
GO Description Details
GOslim ID
GO:0016740,GO:0009059,GO:0005976,GO:0016020,GO:0005794,GO:0071555
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Probable galacturonosyltransferase-like 8
OrthoDB(1 item)
115325at33090
Hexosyltransferase
Pfam(1 item)
 
Glycosyl transferase family 8
InterPro(2 items)
 
Nucleotide-diphossugar_trans
 
Glycosyl transferase, family 8
Gene ontology(6 items)
CC
integral component of membrane
CC
Golgi apparatus
MF
polygalacturonate 4-alpha-galacturonosyltransferase activity
BP
pectin biosynthetic process
BP
cell wall organization
CC
Golgi membrane
GO slim(6 items)
MF
transferase activity
BP
macromolecule biosynthetic process
BP
polysaccharide metabolic process
CC
Golgi apparatus
BP
cell wall organization

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.