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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G22540.1
PEP
AT1G22540.1
Position on the Genome Chromosome Chr1
Start Position 7964202
End Position 7966222
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01937631
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Proton-dependent oligopeptide transporter family
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Protein NRT1/ PTR FAMILY 5.10
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF00854
Pfam Description Details
InterPro ID
IPR036259,IPR000109,IPR018456
InterPro Description Details
GO ID
GO:0016021,GO:0022857,GO:0006857
GO Description Details
GOslim ID
GO:0015833,GO:0006810,GO:0005215,GO:0016020
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G22540
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Protein NRT1/ PTR FAMILY 5.10
OrthoDB(1 item)
44401at33090
Proton-dependent oligopeptide transporter family
Pfam(1 item)
 
POT family
InterPro(3 items)
 
Proton-dependent oligopeptide transporter family
 
PTR2_symporter_CS
Gene ontology(3 items)
CC
integral component of membrane
MF
transmembrane transporter activity
BP
oligopeptide transport
GO slim(4 items)
BP
peptide transport
MF
transporter activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.