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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G22430.1
PEP
AT1G22430.1
Position on the Genome Chromosome Chr1
Start Position 7919235
End Position 7921594
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00319626
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Alcohol dehydrogenase, C-terminal
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Alcohol dehydrogenase-like 1
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF08240,PF00107
Pfam Description Details
InterPro ID
IPR013154,IPR013149,IPR002328,IPR036291,IPR011032
InterPro Description Details
GO ID
GO:0005634,GO:0004024,GO:0008270,GO:0046294,GO:0005829,GO:0051903
GO Description Details
GOslim ID
GO:0043167,GO:0016491,GO:0050896,GO:0005737,GO:0005634,GO:0006081
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G22430
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Alcohol dehydrogenase-like 1
OrthoDB(1 item)
102037at33090
Alcohol dehydrogenase, C-terminal
Pfam(2 items)
 
Alcohol dehydrogenase GroES-like domain
 
Zinc-binding dehydrogenase
InterPro(5 items)
 
Alcohol dehydrogenase, N-terminal
 
Alcohol dehydrogenase, C-terminal
 
NAD(P)-bd_dom_sf
 
GroES-like_sf
Gene ontology(6 items)
MF
alcohol dehydrogenase activity, zinc-dependent
MF
zinc ion binding
BP
formaldehyde catabolic process
MF
S-(hydroxymethyl)glutathione dehydrogenase activity
GO slim(6 items)
MF
oxidoreductase activity
BP
response to stimulus
BP
cellular aldehyde metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.