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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G22310.2
PEP
AT1G22310.2
Position on the Genome Chromosome Chr1
Start Position 7881714
End Position 7883644
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00420386
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Methyl-CpG-binding domain-containing protein 8
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Methyl-CpG-binding domain-containing protein 8
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF01429,PF02178
Pfam Description Details
InterPro ID
IPR016177,IPR037472,IPR017956,IPR001739
InterPro Description Details
GO ID
GO:0005634,GO:0008327
GO Description Details
GOslim ID
GO:0005634,GO:0003676,GO:0000166
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Methyl-CpG-binding domain-containing protein 8
OrthoDB(1 item)
134376at33090
Methyl-CpG-binding domain-containing protein 8
Pfam(2 items)
 
Methyl-CpG binding domain
 
AT hook motif
InterPro(4 items)
 
DNA-bd_dom_sf
 
AT hook, DNA-binding motif
 
Methyl-CpG DNA binding
Gene ontology(2 items)
MF
methyl-CpG binding
GO slim(3 items)
MF
nucleic acid binding
MF
nucleotide binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.