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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G21970.1
PEP
AT1G21970.1
Position on the Genome Chromosome Chr1
Start Position 7727750
End Position 7729571
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00197685
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Transcription factor CBF/NF-Y/archaeal histone domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
NF-YB9
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00808
Pfam Description Details
InterPro ID
IPR009072,IPR003958,IPR003956
InterPro Description Details
GO ID
GO:0005634,GO:0046982,GO:0006355,GO:0043565
GO Description Details
GOslim ID
GO:0050789,GO:0003676,GO:0005515,GO:0006351,GO:0005634
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
NF-YB family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
OrthoDB(1 item)
157671at33090
Transcription factor CBF/NF-Y/archaeal histone domain
Pfam(1 item)
 
Histone-like transcription factor (CBF/NF-Y) and archaeal histone
InterPro(3 items)
 
Transcription factor CBF/NF-Y/archaeal histone domain
 
Transcrpt_fac_NFYB/HAP3_CS
Gene ontology(4 items)
MF
protein heterodimerization activity
BP
regulation of transcription, DNA-templated
MF
sequence-specific DNA binding
GO slim(5 items)
BP
regulation of biological process
MF
nucleic acid binding
MF
protein binding
BP
transcription, DNA-templated

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.