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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G20020.1
PEP
AT1G20020.1
Position on the Genome Chromosome Chr1
Start Position 6942851
End Position 6944868
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00138879
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Ferredoxin--NADP reductase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF00175
Pfam Description Details
InterPro ID
IPR001709,IPR015701,IPR017938,IPR035442,IPR017927,IPR039261,IPR001433
InterPro Description Details
GO ID
GO:0098807,GO:0005634,GO:0009570,GO:0009507,GO:0015979,GO:0009535,GO:0042742,GO:0009817,GO:0009534,GO:0009579,GO:0004324,GO:0008266,GO:0048046
GO Description Details
GOslim ID
GO:0016020,GO:0009536,GO:0044419,GO:0016491,GO:0003676,GO:0002376,GO:0005576,GO:0009579,GO:0015979,GO:0050896,GO:0032991,GO:0005634
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G20020
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic
OrthoDB(1 item)
103079at33090
Ferredoxin--NADP reductase
Pfam(1 item)
 
Oxidoreductase NAD-binding domain
InterPro(7 items)
 
Flavoprot_Pyr_Nucl_cyt_Rdtase
 
Riboflavin_synthase-like_b-brl
 
FNR_plant_Cyanobacteria
 
FAD-bd_FR_type
 
FNR_nucleotide-bd
 
Oxidoreductase FAD/NAD(P)-binding
Gene ontology(13 items)
CC
chloroplast thylakoid membrane protein complex
CC
chloroplast stroma
BP
photosynthesis
CC
chloroplast thylakoid membrane
BP
defense response to bacterium
BP
defense response to fungus
CC
chloroplast thylakoid
MF
ferredoxin-NADP+ reductase activity
MF
poly(U) RNA binding
GO slim(12 items)
BP
interspecies interaction between organisms
MF
oxidoreductase activity
MF
nucleic acid binding
BP
immune system process
CC
extracellular region
BP
photosynthesis
BP
response to stimulus
CC
protein-containing complex

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.