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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G19730.1
PEP
AT1G19730.1
Position on the Genome Chromosome Chr1
Start Position 6823163
End Position 6824020
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00403258
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Thioredoxin
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Thioredoxin H4
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF00085
Pfam Description Details
InterPro ID
IPR005746,IPR013766,IPR036249,IPR017937
InterPro Description Details
GO ID
GO:0015035,GO:0010497,GO:0006979,GO:0004857,GO:0005829,GO:0009409,GO:0045454,GO:0006662,GO:0016671
GO Description Details
GOslim ID
GO:0030234,GO:0050789,GO:0006662,GO:0050896,GO:0006810,GO:0016491,GO:0005737,GO:0065008
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G19730
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Thioredoxin H4
OrthoDB(1 item)
221831at33090
Thioredoxin
Pfam(1 item)
 
Thioredoxin
InterPro(4 items)
 
Thioredoxin domain
 
Thioredoxin-like_sf
 
Thioredoxin_CS
Gene ontology(9 items)
MF
protein disulfide oxidoreductase activity
BP
plasmodesmata-mediated intercellular transport
BP
response to oxidative stress
MF
enzyme inhibitor activity
BP
response to cold
BP
cell redox homeostasis
BP
glycerol ether metabolic process
MF
oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
GO slim(8 items)
MF
enzyme regulator activity
BP
regulation of biological process
BP
glycerol ether metabolic process
BP
response to stimulus
MF
oxidoreductase activity
BP
regulation of biological quality

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.