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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G19150.1
PEP
AT1G19150.1
Position on the Genome Chromosome Chr1
Start Position 6612806
End Position 6613799
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00579465
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Chlorophyll A-B binding protein
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Photosystem I chlorophyll a/b-binding protein 6, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF00504
Pfam Description Details
InterPro ID
IPR022796,IPR001344,IPR023329
InterPro Description Details
GO ID
GO:0009507,GO:0009522,GO:0009768,GO:0046872,GO:0018298,GO:0009535,GO:0016168,GO:0009416,GO:0016021
GO Description Details
GOslim ID
GO:0016020,GO:0043167,GO:0050896,GO:0009579,GO:0006091,GO:0006464,GO:0009536,GO:0015979,GO:0046906,GO:0009521
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G19150
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Photosystem I chlorophyll a/b-binding protein 6, chloroplastic
OrthoDB(1 item)
142113at33090
Chlorophyll A-B binding protein
Pfam(1 item)
 
Chlorophyll A-B binding protein
InterPro(3 items)
 
Chlorophyll A-B binding protein
 
Chloro_AB-bd_pln
 
Chlorophyll_a/b-bd_dom_sf
Gene ontology(9 items)
CC
photosystem I
BP
photosynthesis, light harvesting in photosystem I
MF
metal ion binding
BP
protein-chromophore linkage
CC
chloroplast thylakoid membrane
MF
chlorophyll binding
BP
response to light stimulus
CC
integral component of membrane
GO slim(10 items)
BP
response to stimulus
BP
generation of precursor metabolites and energy
BP
cellular protein modification process
BP
photosynthesis
MF
tetrapyrrole binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.