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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G18840.1
PEP
AT1G18840.1
Position on the Genome Chromosome Chr1
Start Position 6501068
End Position 6503435
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00065688
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
IQ motif, EF-hand binding site
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
DUF4005 domain-containing protein
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00612,PF13178
Pfam Description Details
InterPro ID
IPR000048,IPR025064,IPR027417
InterPro Description Details
GO ID
GO:0005516
GO Description Details
GOslim ID
GO:0005515
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
DUF4005 domain-containing protein
OrthoDB(1 item)
103665at33090
IQ motif, EF-hand binding site
Pfam(2 items)
 
IQ calmodulin-binding motif
 
Protein of unknown function (DUF4005)
InterPro(3 items)
 
IQ motif, EF-hand binding site
 
Domain of unknown function DUF4005
 
P-loop_NTPase
Gene ontology(1 item)
MF
calmodulin binding
GO slim(1 item)
MF
protein binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.