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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G18400.1
PEP
AT1G18400.1
Position on the Genome Chromosome Chr1
Start Position 6331464
End Position 6333576
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01819548
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Myc-type, basic helix-loop-helix (bHLH) domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Transcription factor BEE 1
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00010
Pfam Description Details
InterPro ID
IPR024097,IPR011598,IPR036638
InterPro Description Details
GO ID
GO:0003677,GO:0006351,GO:1902448,GO:0005634,GO:0003700,GO:0006355,GO:0046983
GO Description Details
GOslim ID
GO:0065009,GO:0003676,GO:0005634,GO:0050789,GO:0006351,GO:0050896,GO:0005515
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
bHLH family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Transcription factor BEE 1
OrthoDB(1 item)
210810at33090
Myc-type, basic helix-loop-helix (bHLH) domain
Pfam(1 item)
 
Helix-loop-helix DNA-binding domain
InterPro(3 items)
 
Myc-type, basic helix-loop-helix (bHLH) domain
 
HLH_DNA-bd_sf
Gene ontology(7 items)
BP
transcription, DNA-templated
BP
positive regulation of shade avoidance
MF
DNA-binding transcription factor activity
BP
regulation of transcription, DNA-templated
MF
protein dimerization activity
GO slim(7 items)
BP
regulation of molecular function
MF
nucleic acid binding
BP
regulation of biological process
BP
transcription, DNA-templated
BP
response to stimulus
MF
protein binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.