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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G18270.3
PEP
AT1G18270.3
Position on the Genome Chromosome Chr1
Start Position 6283634
End Position 6293772
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01308249
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Four-carbon acid sugar kinase, N-terminal domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Ketose-bisphosphate aldolase class-II family protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF03446,PF07005,PF14833,PF17042,PF01116
Pfam Description Details
InterPro ID
IPR036291,IPR000771,IPR008927,IPR006115,IPR031475,IPR013328,IPR010737,IPR042213,IPR037051,IPR002204,IPR013785,IPR029154
InterPro Description Details
GO ID
GO:0016832,GO:0051287,GO:0006096,GO:0005634,GO:0016301,GO:0005524,GO:0016491,GO:0050661,GO:0008270
GO Description Details
GOslim ID
GO:0005634,GO:0000166,GO:0006091,GO:0009117,GO:0016740,GO:0016491,GO:0043167,GO:0016829,GO:0005975,GO:0006793,GO:0006082,GO:0016853
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Ketose-bisphosphate aldolase class-II family protein
OrthoDB(1 item)
3764at33090
Four-carbon acid sugar kinase, N-terminal domain
Pfam(5 items)
 
NAD binding domain of 6-phosphogluconate dehydrogenase
 
Putative sugar-binding N-terminal domain
 
NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
 
Putative nucleotide-binding of sugar-metabolising enzyme
 
Fructose-bisphosphate aldolase class-II
InterPro(12 items)
 
NAD(P)-bd_dom_sf
 
Fructose-bisphosphate aldolase, class-II
 
6-PGluconate_DH-like_C_sf
 
6-phosphogluconate dehydrogenase, NADP-binding
 
Four-carbon acid sugar kinase, C-terminal domain
 
Four-carbon acid sugar kinase, N-terminal domain
 
4-carb_acid_sugar_kinase_N_sf
 
3-OH-isobutyrate_DH-rel_CS
 
3-hydroxyisobutyrate dehydrogenase, NAD-binding domain
Gene ontology(9 items)
MF
aldehyde-lyase activity
BP
glycolytic process
MF
kinase activity
MF
oxidoreductase activity
MF
zinc ion binding
GO slim(12 items)
MF
nucleotide binding
BP
generation of precursor metabolites and energy
BP
nucleotide metabolic process
MF
transferase activity
MF
oxidoreductase activity
MF
lyase activity
BP
carbohydrate metabolic process
BP
phosphorus metabolic process
BP
organic acid metabolic process
MF
isomerase activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.