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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G18210.1
PEP
AT1G18210.1
Position on the Genome Chromosome Chr1
Start Position 6268273
End Position 6268785
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00295323
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
EF-hand domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Probable calcium-binding protein CML27
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF13499
Pfam Description Details
InterPro ID
IPR039647,IPR002048,IPR018247,IPR011992
InterPro Description Details
GO ID
GO:0005829,GO:0005773,GO:0005634,GO:0005509,GO:0005886
GO Description Details
GOslim ID
GO:0005634,GO:0005737,GO:0043167,GO:0005773,GO:0016020
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G18210
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Probable calcium-binding protein CML27
OrthoDB(1 item)
204199at33090
EF-hand domain
Pfam(1 item)
 
EF-hand domain pair
InterPro(4 items)
 
EF_hand_pair_protein_CML-like
 
EF-hand domain
 
EF_Hand_1_Ca_BS
 
EF-hand-dom_pair
Gene ontology(5 items)
MF
calcium ion binding
CC
plasma membrane
GO slim(5 items)

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.