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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G17610.1
PEP
AT1G17610.1
Position on the Genome Chromosome Chr1
Start Position 6056895
End Position 6058157
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00337299
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Toll/interleukin-1 receptor homology (TIR) domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Disease resistance protein CHS1
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF00931,PF01582
Pfam Description Details
InterPro ID
IPR027417,IPR000157,IPR035897,IPR002182
InterPro Description Details
GO ID
GO:0046713,GO:0006952,GO:0050135,GO:0007165,GO:0005737,GO:0005634,GO:0061809,GO:0043531
GO Description Details
GOslim ID
GO:0050896,GO:0000166,GO:0007154,GO:0050789,GO:0043167,GO:0009975,GO:0005634,GO:0006811,GO:0016787,GO:0005737
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Disease resistance protein CHS1
OrthoDB(1 item)
100095at33090
Toll/interleukin-1 receptor homology (TIR) domain
Pfam(2 items)
 
NB-ARC domain
 
TIR domain
InterPro(4 items)
 
P-loop_NTPase
 
Toll/interleukin-1 receptor homology (TIR) domain
 
Toll_tir_struct_dom_sf
Gene ontology(8 items)
BP
borate transport
BP
defense response
MF
NAD(P)+ nucleosidase activity
BP
signal transduction
MF
NAD+ nucleotidase, cyclic ADP-ribose generating
GO slim(10 items)
BP
response to stimulus
MF
nucleotide binding
BP
cell communication
BP
regulation of biological process
MF
cyclase activity
BP
ion transport
MF
hydrolase activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.