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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G17210.1
PEP
AT1G17210.1
Position on the Genome Chromosome Chr1
Start Position 5880502
End Position 5884657
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00157872
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Zinc finger, C3HC-like
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
ILP1
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF07967
Pfam Description Details
InterPro ID
IPR012935
InterPro Description Details
GO ID
GO:0008270,GO:0005634
GO Description Details
GOslim ID
GO:0005634,GO:0043167
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
OrthoDB(1 item)
14722at33090
Zinc finger, C3HC-like
Pfam(1 item)
 
C3HC zinc finger-like
InterPro(1 item)
 
Zinc finger, C3HC-like
Gene ontology(2 items)
MF
zinc ion binding
GO slim(2 items)

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.