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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G17050.1
PEP
AT1G17050.1
Position on the Genome Chromosome Chr1
Start Position 5829289
End Position 5831215
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00404170
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Polyprenyl synthetase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Solanesyl diphosphate synthase 2, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF00348
Pfam Description Details
InterPro ID
IPR000092,IPR008949,IPR033749
InterPro Description Details
GO ID
GO:0004659,GO:0010236,GO:0009570,GO:0046872,GO:0052924,GO:0008299,GO:0050347,GO:0009536,GO:0009507
GO Description Details
GOslim ID
GO:0016740,GO:0009536,GO:0043167,GO:0042180,GO:0044255
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G17050
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Solanesyl diphosphate synthase 2, chloroplastic
OrthoDB(1 item)
163852at33090
Polyprenyl synthetase
Pfam(1 item)
 
Polyprenyl synthetase
InterPro(3 items)
 
Polyprenyl synthetase
 
Isoprenoid_synthase_dom_sf
 
Polyprenyl_synt_CS
Gene ontology(9 items)
MF
prenyltransferase activity
BP
plastoquinone biosynthetic process
CC
chloroplast stroma
MF
metal ion binding
MF
all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity
BP
isoprenoid biosynthetic process
MF
trans-octaprenyltranstransferase activity
GO slim(5 items)
MF
transferase activity
BP
cellular ketone metabolic process
BP
cellular lipid metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.