Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G16300.1
PEP
AT1G16300.1
Position on the Genome Chromosome Chr1
Start Position 5574433
End Position 5577406
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00579157
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Glyceraldehyde-3-phosphate dehydrogenase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF02800,PF00044
Pfam Description Details
InterPro ID
IPR020830,IPR020831,IPR006424,IPR020828,IPR020829,IPR036291
InterPro Description Details
GO ID
GO:0009536,GO:0006096,GO:0005829,GO:0080022,GO:0050661,GO:0051287,GO:0006006,GO:0080144,GO:0005975,GO:0009570,GO:0004365
GO Description Details
GOslim ID
GO:0065008,GO:0016491,GO:0005975,GO:0016829,GO:0032502,GO:0016853,GO:0006091,GO:0009536,GO:0032501,GO:0009117,GO:0016740,GO:0006082,GO:0000166,GO:0005737
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G16300
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.