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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G15790.3
PEP
AT1G15790.3
Position on the Genome Chromosome Chr1
Start Position 5438680
End Position 5439820
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01399813
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Mediator complex subunit 15, KIX domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Mediator of RNA polymerase II transcription subunit 15a-like protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF16987
Pfam Description Details
InterPro ID
IPR036529,IPR036546
InterPro Description Details
GO ID
GO:0031490,GO:0006355,GO:0016021,GO:0003712,GO:0005634
GO Description Details
GOslim ID
GO:0065009,GO:0016020,GO:0016070,GO:0006351,GO:0009059,GO:0003682,GO:0050789,GO:0005634,GO:0003676
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Mediator of RNA polymerase II transcription subunit 15a-like protein
OrthoDB(1 item)
200696at33090
Mediator complex subunit 15, KIX domain
Pfam(1 item)
 
KIX domain
InterPro(2 items)
 
Mediator complex subunit 15, KIX domain
Gene ontology(5 items)
MF
chromatin DNA binding
BP
regulation of transcription, DNA-templated
CC
integral component of membrane
MF
transcription coregulator activity
GO slim(9 items)
BP
regulation of molecular function
BP
RNA metabolic process
BP
transcription, DNA-templated
BP
macromolecule biosynthetic process
MF
chromatin binding
BP
regulation of biological process
MF
nucleic acid binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.