Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G15250.1
PEP
AT1G15250.1
Position on the Genome Chromosome Chr1
Start Position 5248825
End Position 5249381
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00217959
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Ribosomal protein L37
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
60S ribosomal protein L37-1
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF01907
Pfam Description Details
InterPro ID
IPR001569,IPR011332,IPR011331,IPR018267
InterPro Description Details
GO ID
GO:0006412,GO:0046872,GO:0003723,GO:0005576,GO:0003735,GO:0003729,GO:0019843,GO:0022625
GO Description Details
GOslim ID
GO:1990904,GO:0005840,GO:0003676,GO:0005198,GO:0005737,GO:0043167,GO:0005576
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G15250
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
60S ribosomal protein L37-1
OrthoDB(1 item)
223438at33090
Ribosomal protein L37
Pfam(1 item)
 
Ribosomal protein L37e
InterPro(4 items)
 
Ribosomal protein L37e
 
Ribosomal_zn-bd
 
Ribosomal_L37ae/L37e
 
Ribosomal_L37e_CS
Gene ontology(8 items)
MF
metal ion binding
CC
extracellular region
MF
structural constituent of ribosome
CC
cytosolic large ribosomal subunit
GO slim(7 items)
CC
ribonucleoprotein complex
MF
nucleic acid binding
MF
structural molecule activity
CC
extracellular region

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.