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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G15220.1
PEP
AT1G15220.1
Position on the Genome Chromosome Chr1
Start Position 5240471
End Position 5241117
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00338271
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Cytochrome c-type biogenesis protein
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Cytochrome c-type biogenesis CcmH-like mitochondrial protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF03918
Pfam Description Details
InterPro ID
IPR038297,IPR005616
InterPro Description Details
GO ID
GO:0016491,GO:0017004,GO:0005739,GO:0005743,GO:0046872,GO:0016021,GO:0009793
GO Description Details
GOslim ID
GO:0000003,GO:0032501,GO:0032502,GO:0016491,GO:0016020,GO:0043167,GO:0005739,GO:0065003
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G15220
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Cytochrome c-type biogenesis CcmH-like mitochondrial protein
OrthoDB(1 item)
190478at33090
Cytochrome c-type biogenesis protein
Pfam(1 item)
 
Cytochrome C biogenesis protein
InterPro(2 items)
 
CcmH/CycL/NrfF/Ccl2_sf
 
CcmH/CycL/Ccl2/NrfF family
Gene ontology(7 items)
MF
oxidoreductase activity
BP
cytochrome complex assembly
CC
mitochondrion
CC
mitochondrial inner membrane
MF
metal ion binding
CC
integral component of membrane
BP
embryo development ending in seed dormancy
GO slim(8 items)
BP
multicellular organismal process
BP
developmental process
MF
oxidoreductase activity
CC
mitochondrion
BP
protein-containing complex assembly

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.