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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G13740.1
PEP
AT1G13740.1
Position on the Genome Chromosome Chr1
Start Position 4713969
End Position 4715158
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00414115
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Ninja family
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Ninja-family protein AFP2
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF07897,PF16135,PF16136
Pfam Description Details
InterPro ID
IPR012463,IPR032310,IPR032308,IPR031307
InterPro Description Details
GO ID
GO:0009737,GO:0005634,GO:0009414,GO:0045892,GO:0007165
GO Description Details
GOslim ID
GO:0007154,GO:0050789,GO:0050896,GO:0005634,GO:0006351
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Ninja-family protein AFP2
OrthoDB(1 item)
174689at33090
Ninja family
Pfam(3 items)
 
Ethylene-responsive binding factor-associated repression
 
TPL-binding domain in jasmonate signalling
 
Putative nuclear localisation signal
InterPro(4 items)
 
Ethylene-responsive binding factor-associated repression
 
Putative nuclear localisation signal
 
Jas TPL-binding domain
Gene ontology(5 items)
BP
response to abscisic acid
BP
response to water deprivation
BP
negative regulation of transcription, DNA-templated
BP
signal transduction
GO slim(5 items)
BP
cell communication
BP
regulation of biological process
BP
response to stimulus
BP
transcription, DNA-templated

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.