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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G13460.1
PEP
AT1G13460.1
Position on the Genome Chromosome Chr1
Start Position 4616504
End Position 4618180
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00139952
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Protein phosphatase 2A, regulatory B subunit, B56
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B theta isoform
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF01603
Pfam Description Details
InterPro ID
IPR011989,IPR002554,IPR016024
InterPro Description Details
GO ID
GO:0000159,GO:0009742,GO:0005829,GO:0005777,GO:0019888,GO:1900458,GO:0032000
GO Description Details
GOslim ID
GO:0006464,GO:0016787,GO:0050789,GO:0055114,GO:0042180,GO:0042579,GO:0008287,GO:0030234,GO:0050896,GO:0005515,GO:0006082,GO:0007154,GO:0006793,GO:0005737,GO:0044255
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G13460
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B theta isoform
OrthoDB(1 item)
58962at33090
Protein phosphatase 2A, regulatory B subunit, B56
Pfam(1 item)
 
Protein phosphatase 2A regulatory B subunit (B56 family)
InterPro(3 items)
 
Protein phosphatase 2A, regulatory B subunit, B56
 
ARM-type_fold
Gene ontology(7 items)
CC
protein phosphatase type 2A complex
BP
brassinosteroid mediated signaling pathway
MF
protein phosphatase regulator activity
BP
negative regulation of brassinosteroid mediated signaling pathway
BP
positive regulation of fatty acid beta-oxidation
GO slim(15 items)
BP
cellular protein modification process
MF
hydrolase activity
BP
regulation of biological process
BP
oxidation-reduction process
BP
cellular ketone metabolic process
CC
protein serine/threonine phosphatase complex
MF
enzyme regulator activity
BP
response to stimulus
MF
protein binding
BP
organic acid metabolic process
BP
cell communication
BP
phosphorus metabolic process
BP
cellular lipid metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.