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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G13210.1
PEP
AT1G13210.1
Position on the Genome Chromosome Chr1
Start Position 4509252
End Position 4513774
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00306338
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
P-type ATPase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Phospholipid-transporting ATPase
Accession
CrossRef Refseq from UniProt
NA
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF16212,PF16209
Pfam Description Details
InterPro ID
IPR023299,IPR036412,IPR032630,IPR018303,IPR023298,IPR032631,IPR001757,IPR008250,IPR006539
InterPro Description Details
GO ID
GO:0015914,GO:0140326,GO:0000287,GO:0005524,GO:0016021
GO Description Details
GOslim ID
GO:0043167,GO:0005215,GO:0006869,GO:0006811,GO:0016020,GO:0016787,GO:0000166,GO:0065008,GO:0061024
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Phospholipid-transporting ATPase
OrthoDB(1 item)
3509at33090
P-type ATPase
Pfam(2 items)
 
Phospholipid-translocating P-type ATPase C-terminal
 
Phospholipid-translocating ATPase N-terminal
InterPro(9 items)
 
ATPase_P-typ_cyto_dom_N
 
P-type ATPase, C-terminal
 
ATPase_P-typ_P_site
 
ATPase_P-typ_TM_dom_sf
 
P-type ATPase, N-terminal
 
ATPase_P-typ_transduc_dom_A_sf
 
P-type_ATPase_IV
Gene ontology(5 items)
BP
phospholipid transport
MF
ATPase-coupled intramembrane lipid transporter activity
MF
magnesium ion binding
CC
integral component of membrane
GO slim(9 items)
MF
transporter activity
BP
lipid transport
BP
ion transport
MF
hydrolase activity
MF
nucleotide binding
BP
regulation of biological quality
BP
membrane organization

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.