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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G12820.1
PEP
AT1G12820.1
Position on the Genome Chromosome Chr1
Start Position 4368879
End Position 4370780
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00459764
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Leucine-rich repeat, cysteine-containing subtype
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Protein AUXIN SIGNALING F-BOX 3
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF18511,PF18791
Pfam Description Details
InterPro ID
IPR032675,IPR041567,IPR001810,IPR041101
InterPro Description Details
GO ID
GO:0006952,GO:0019005,GO:0048443,GO:0010011,GO:0009734,GO:0000822,GO:0080022,GO:0016567,GO:0048527,GO:0071249,GO:0031146,GO:0010152,GO:0005634
GO Description Details
GOslim ID
GO:0050789,GO:0006508,GO:0042562,GO:0043167,GO:0005634,GO:0032501,GO:0032502,GO:0050896,GO:0000003,GO:0007154,GO:0043178,GO:0009057,GO:0000151,GO:0006464
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.