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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G10870.2
PEP
AT1G10870.2
Position on the Genome Chromosome Chr1
Start Position 3616905
End Position 3623612
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01340346
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Ankyrin repeat-containing domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
ARF-GAP domain 4
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF12796,PF01412,PF00169
Pfam Description Details
InterPro ID
IPR002110,IPR011993,IPR001164,IPR038508,IPR004148,IPR035670,IPR036770,IPR020683,IPR037278,IPR027267,IPR001849
InterPro Description Details
GO ID
GO:0005737,GO:0005096,GO:0046872
GO Description Details
GOslim ID
GO:0016787,GO:0043167,GO:0030234,GO:0005737
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
ARF-GAP domain 4
OrthoDB(1 item)
17323at33090
Ankyrin repeat-containing domain
Pfam(3 items)
 
Ankyrin repeats (3 copies)
 
Putative GTPase activating protein for Arf
 
PH domain
InterPro(11 items)
 
Ankyrin repeat
 
PH-like_dom_sf
 
Arf GTPase activating protein
 
ArfGAP_dom_sf
 
AGD1/2/3/4_BAR_plant
 
Ankyrin_rpt-contain_sf
 
Ankyrin repeat-containing domain
 
AH/BAR_dom_sf
 
Pleckstrin homology domain
Gene ontology(3 items)
MF
GTPase activator activity
MF
metal ion binding
GO slim(4 items)
MF
hydrolase activity
MF
enzyme regulator activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.