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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G10570.1
PEP
AT1G10570.1
Position on the Genome Chromosome Chr1
Start Position 3487639
End Position 3491102
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01199505
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Ulp1 protease family, C-terminal catalytic domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Ubiquitin-like-specific protease 1C
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF02902
Pfam Description Details
InterPro ID
IPR038765,IPR003653
InterPro Description Details
GO ID
GO:0005634,GO:0009651,GO:0016926,GO:0005654,GO:0070139,GO:0070140,GO:0010228
GO Description Details
GOslim ID
GO:0050896,GO:0032502,GO:0000003,GO:0005634,GO:0032501,GO:0008233,GO:0006508,GO:0006464
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G10570
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Ubiquitin-like-specific protease 1C
OrthoDB(1 item)
147929at33090
Ulp1 protease family, C-terminal catalytic domain
Pfam(1 item)
 
Ulp1 protease family, C-terminal catalytic domain
InterPro(2 items)
 
Papain-like_cys_pep_sf
 
Ulp1 protease family, C-terminal catalytic domain
Gene ontology(7 items)
BP
response to salt stress
BP
protein desumoylation
MF
SUMO-specific endopeptidase activity
MF
SUMO-specific isopeptidase activity
BP
vegetative to reproductive phase transition of meristem
GO slim(8 items)
BP
response to stimulus
BP
developmental process
BP
multicellular organismal process
MF
peptidase activity
BP
cellular protein modification process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.