Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G09950.1
PEP
AT1G09950.1
Position on the Genome Chromosome Chr1
Start Position 3240849
End Position 3241541
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00268045
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Transcription factor TGA like domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Protein RESPONSE TO ABA AND SALT 1
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF14144
Pfam Description Details
InterPro ID
IPR025422
InterPro Description Details
GO ID
GO:0009738,GO:0009651,GO:0009737,GO:0009788,GO:1900070,GO:0043565,GO:0006351
GO Description Details
GOslim ID
GO:0003676,GO:0007154,GO:0050896,GO:0050789,GO:0006351
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Protein RESPONSE TO ABA AND SALT 1
OrthoDB(1 item)
198024at33090
Transcription factor TGA like domain
Pfam(1 item)
 
Seed dormancy control
InterPro(1 item)
 
Transcription factor TGA like domain
Gene ontology(7 items)
BP
abscisic acid-activated signaling pathway
BP
response to salt stress
BP
response to abscisic acid
BP
negative regulation of abscisic acid-activated signaling pathway
BP
negative regulation of cellular hyperosmotic salinity response
MF
sequence-specific DNA binding
BP
transcription, DNA-templated
GO slim(5 items)
MF
nucleic acid binding
BP
cell communication
BP
response to stimulus
BP
regulation of biological process
BP
transcription, DNA-templated

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.