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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G08930.1
PEP
AT1G08930.1
Position on the Genome Chromosome Chr1
Start Position 2873604
End Position 2876979
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00144101
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Major facilitator, sugar transporter-like
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Sugar transporter ERD6
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF00083
Pfam Description Details
InterPro ID
IPR036259,IPR005829,IPR005828,IPR020846,IPR003663
InterPro Description Details
GO ID
GO:0009737,GO:0051119,GO:0009409,GO:0009414,GO:0010200,GO:0005783,GO:0016021,GO:0009651
GO Description Details
GOslim ID
GO:0050896,GO:0005215,GO:0008643,GO:0005783,GO:0016020
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G08930
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Sugar transporter ERD6
OrthoDB(1 item)
119204at33090
Major facilitator, sugar transporter-like
Pfam(1 item)
 
Sugar (and other) transporter
InterPro(5 items)
 
Sugar_transporter_CS
 
Major facilitator, sugar transporter-like
 
Sugar/inositol_transpt
Gene ontology(8 items)
BP
response to abscisic acid
MF
sugar transmembrane transporter activity
BP
response to cold
BP
response to water deprivation
BP
response to chitin
CC
endoplasmic reticulum
CC
integral component of membrane
BP
response to salt stress
GO slim(5 items)
BP
response to stimulus
MF
transporter activity
BP
carbohydrate transport
CC
endoplasmic reticulum

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.