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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G08000.1
PEP
AT1G08000.1
Position on the Genome Chromosome Chr1
Start Position 2483460
End Position 2484564
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00395475
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Zinc finger, GATA-type
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
GATA transcription factor 10
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00320
Pfam Description Details
InterPro ID
IPR013088,IPR000679
InterPro Description Details
GO ID
GO:0003700,GO:0005634,GO:0008270,GO:0030154,GO:0043565
GO Description Details
GOslim ID
GO:0043167,GO:0006351,GO:0032502,GO:0005634,GO:0050789,GO:0003676,GO:0065009
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
GATA family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
GATA transcription factor 10
OrthoDB(1 item)
181155at33090
Zinc finger, GATA-type
Pfam(1 item)
 
GATA zinc finger
InterPro(2 items)
 
Zinc finger, GATA-type
Gene ontology(5 items)
MF
DNA-binding transcription factor activity
MF
zinc ion binding
BP
cell differentiation
MF
sequence-specific DNA binding
GO slim(7 items)
BP
transcription, DNA-templated
BP
developmental process
BP
regulation of biological process
MF
nucleic acid binding
BP
regulation of molecular function

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.