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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G07400.1
PEP
AT1G07400.1
Position on the Genome Chromosome Chr1
Start Position 2275148
End Position 2275621
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00405208
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Alpha crystallin/Hsp20 domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
17.8 kDa class I heat shock protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF00011
Pfam Description Details
InterPro ID
IPR008978,IPR031107,IPR002068
InterPro Description Details
GO ID
GO:0005737,GO:0043621,GO:0071456,GO:0051082,GO:0042542,GO:0000302,GO:0009408,GO:0009651,GO:0006979,GO:0006457,GO:0051259
GO Description Details
GOslim ID
GO:0050896,GO:0005737,GO:0005515,GO:0065003,GO:0006457
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G07400
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
17.8 kDa class I heat shock protein
OrthoDB(1 item)
228350at33090
Alpha crystallin/Hsp20 domain
Pfam(1 item)
 
Hsp20/alpha crystallin family
InterPro(3 items)
 
HSP20-like_chaperone
 
Alpha crystallin/Hsp20 domain
Gene ontology(11 items)
MF
protein self-association
BP
cellular response to hypoxia
MF
unfolded protein binding
BP
response to hydrogen peroxide
BP
response to reactive oxygen species
BP
response to heat
BP
response to salt stress
BP
response to oxidative stress
BP
protein folding
BP
protein complex oligomerization
GO slim(5 items)
BP
response to stimulus
MF
protein binding
BP
protein-containing complex assembly
BP
protein folding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.