Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G07000.1
PEP
AT1G07000.1
Position on the Genome Chromosome Chr1
Start Position 2150398
End Position 2152305
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00139484
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Exocyst complex component Exo70
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Exocyst complex component EXO70B2
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF03081
Pfam Description Details
InterPro ID
IPR004140,IPR016159
InterPro Description Details
GO ID
GO:0070062,GO:1900426,GO:0005886,GO:1902290,GO:1900150,GO:0000145,GO:0005634,GO:0045335,GO:0009414,GO:0002238,GO:0005737,GO:0006952,GO:0042545,GO:0006887,GO:0002237,GO:0009620,GO:0043621,GO:0005829,GO:0009617,GO:0090333
GO Description Details
GOslim ID
GO:0044419,GO:0050896,GO:0032991,GO:0005515,GO:0005737,GO:0005634,GO:0071555,GO:0048284,GO:0031982,GO:0016192,GO:0010118,GO:0046903,GO:0043229,GO:0016020,GO:0050789,GO:0016050,GO:0043230,GO:0061024
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT1G07000
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Exocyst complex component EXO70B2
OrthoDB(1 item)
37810at33090
Exocyst complex component Exo70
Pfam(1 item)
 
Exo70 exocyst complex subunit
InterPro(2 items)
 
Exocyst complex component Exo70
 
Cullin_repeat-like_dom_sf
Gene ontology(20 items)
CC
extracellular exosome
BP
positive regulation of defense response to bacterium
CC
plasma membrane
BP
positive regulation of defense response to oomycetes
BP
regulation of defense response to fungus
CC
phagocytic vesicle
BP
response to water deprivation
BP
response to molecule of fungal origin
BP
defense response
BP
cell wall modification
BP
response to molecule of bacterial origin
BP
response to fungus
MF
protein self-association
BP
response to bacterium
BP
regulation of stomatal closure
GO slim(18 items)
BP
interspecies interaction between organisms
BP
response to stimulus
CC
protein-containing complex
MF
protein binding
BP
cell wall organization
BP
organelle fusion
BP
vesicle-mediated transport
BP
stomatal movement
CC
intracellular organelle
BP
regulation of biological process
BP
vesicle organization
CC
extracellular organelle
BP
membrane organization

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.