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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT1G06230.1
PEP
AT1G06230.1
Position on the Genome Chromosome Chr1
Start Position 1907626
End Position 1910183
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00084965
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Bromodomain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Transcription factor GTE4
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF17035,PF00439
Pfam Description Details
InterPro ID
IPR027353,IPR001487,IPR036427,IPR038336,IPR037377
InterPro Description Details
GO ID
GO:0005634,GO:0009294,GO:0048364,GO:0045931
GO Description Details
GOslim ID
GO:0000280,GO:0032502,GO:0005634,GO:0009292,GO:0032501,GO:0050789,GO:0007049
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Transcription factor GTE4
OrthoDB(1 item)
126158at33090
Bromodomain
Pfam(2 items)
 
Bromodomain extra-terminal - transcription regulation
 
Bromodomain
InterPro(5 items)
 
Bromodomain-like_sf
Gene ontology(4 items)
BP
DNA mediated transformation
BP
root development
BP
positive regulation of mitotic cell cycle
GO slim(7 items)
BP
nuclear division
BP
developmental process
BP
genetic transfer
BP
multicellular organismal process
BP
regulation of biological process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.