Arabidopsis thalianaAssembly Name:TAIR10
Gene File:Araport11_genes.201606.pep.fasta.gz
| Position on the Genome | Gene Name | CDS | AT1G06220.3 |
| PEP | AT1G06220.3 |
||
| Position on the Genome | Chromosome | Chr1 | |
| Start Position | 1900524 | ||
| End Position | 1904583 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI00076819 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
||
| OrthoDB | Database version | 10.1 | |
| Description | Translation elongation factor EFG/EF2, domain IV |
||
| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | swissprot |
|
| Protein name | 110 kDa U5 small nuclear ribonucleoprotein component CLO |
||
| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | NA |
||
| KEGG entry | |||
| KO ID | NA |
||
| Pfam ID | PF16004,PF00009,PF03144,PF00679,PF03764 |
||
| Pfam Description | Details | ||
| InterPro ID | IPR027417,IPR004161,IPR031950,IPR000640,IPR035647,IPR005517,IPR014721,IPR000795,IPR005225,IPR020568,IPR009000,IPR035655 |
||
| InterPro Description | Details | ||
| GO ID | GO:0048437,GO:1990904,GO:0045694,GO:0005525,GO:0005886,GO:0005576,GO:0016607,GO:0005618,GO:0009793,GO:0030623,GO:0071007,GO:0003924,GO:0046540,GO:0000398 |
||
| GO Description | Details | ||
| GOslim ID | GO:0005618,GO:0000375,GO:0016020,GO:0005681,GO:0000003,GO:0032502,GO:1990904,GO:0005634,GO:0005576,GO:0032501,GO:0000166,GO:0016787,GO:0003676,GO:0030532,GO:0043167,GO:0050789,GO:0001882,GO:0051704 |
||
| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
||
| TF family Description | NA |
||
| Best hit taxonomy | Species | Arabidopsis thaliana | |
| Family | Brassicaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | ath:AT1G06220 | ||
